How to cite
The Enigma-Mouse Dataset builds on experimental data obtained from multiple projects and original sources. When using the Enigma-Mouse Dataset for scientific purposes, please cite:
- the original data source(s) your results depend on and the corresponding paper,
- and, if possible, the Enigma-Mouse dataset repository/homepage.
You can find the corresponding paper for each individual experiment in the Dataset Details section. This ensures proper credit to the experimental labs and researchers, and improves reproducibility.
Click a box to open the BibTeX citation.
Main dataset DOI.
TBA
Original source citation for the OmniMouse subset.
@inproceedings{
willeke2026omnimouse,
title={OmniMouse: Scaling properties of multi-modal, multi-task Brain Models on 150B Neural Tokens},
author={Konstantin Friedrich Willeke and Polina Turishcheva and Alex Gilbert and Goirik Chakrabarty and Hasan Atakan Bedel and Paul G. Fahey and Yongrong Qiu and Marissa A. Weis and Michaela Vystr{\v{c}}ilov{\'a} and Taliah Muhammad and Lydia Ntanavara and Rachel E Froebe and Kayla Ponder and Zheng Huan Tan and Emin Orhan and Erick Cobos and Sophia Sanborn and Katrin Franke and Fabian H. Sinz and Alexander S. Ecker and Andreas S. Tolias},
booktitle={The Fourteenth International Conference on Learning Representations},
year={2026},
url={https://openreview.net/forum?id=mEw4lhAn0F}
}Original source citation for the Sensorium 2022 subset.
@misc{willeke2022sensoriumcompetitionpredictinglargescale,
title={The Sensorium competition on predicting large-scale mouse primary visual cortex activity},
author={Konstantin F. Willeke and Paul G. Fahey and Mohammad Bashiri and Laura Pede and Max F. Burg and Christoph Blessing and Santiago A. Cadena and Zhiwei Ding and Konstantin-Klemens Lurz and Kayla Ponder and Taliah Muhammad and Saumil S. Patel and Alexander S. Ecker and Andreas S. Tolias and Fabian H. Sinz},
year={2022},
eprint={2206.08666},
archivePrefix={arXiv},
primaryClass={q-bio.NC},
url={https://arxiv.org/abs/2206.08666},
}Original source citation for the Platinum Mouse Data subset.
@article{microns2025functional,
title={Functional connectomics spanning multiple areas of mouse visual cortex},
journal={Nature},
volume={640},
number={8058},
pages={435--447},
year={2025},
publisher={Nature Publishing Group UK London}
}Original source citation for the Funccon subset.
@article{ding2025functional,
title={Functional connectomics reveals general wiring rule in mouse visual cortex},
author={Ding, Zhuokun and Fahey, Paul G and Papadopoulos, Stelios and Wang, Eric Y and Celii, Brendan and Papadopoulos, Christos and Chang, Andersen and Kunin, Alexander B and Tran, Dat and Fu, Jiakun and others},
journal={Nature},
volume={640},
number={8058},
pages={459--469},
year={2025},
publisher={Nature Publishing Group UK London}
}Original source citation for the Orimap subset.
@article{fahey2019global,
title={A global map of orientation tuning in mouse visual cortex},
author={Fahey, Paul G and Muhammad, Taliah and Smith, Cameron and Froudarakis, Emmanouil and Cobos, Erick and Fu, Jiakun and Walker, Edgar Y and Yatsenko, Dimitri and Sinz, Fabian H and Reimer, Jacob and others},
journal={bioRxiv},
pages={745323},
year={2019},
publisher={Cold Spring Harbor Laboratory}
}Original source citation for the Bipartite subset.
@article{ding2026functional,
title={Functional bipartite invariance in mouse primary visual cortex receptive fields},
author={Ding, Zhiwei and Tran, Dat and Ponder, Kayla and Ding, Zhuokun and Froebe, Rachel and Ntanavara, Lydia and Fahey, Paul G and Cobos, Erick and Baroni, Luca and Diamantaki, Maria and others},
journal={Nature Neuroscience},
pages={1--13},
year={2026},
publisher={Nature Publishing Group US New York}
}Original source citation for the Sensorium 2023 subset.
@misc{turishcheva2024dynamicsensoriumcompetitionpredicting,
title={The Dynamic Sensorium competition for predicting large-scale mouse visual cortex activity from videos},
author={Polina Turishcheva and Paul G. Fahey and Laura Hansel and Rachel Froebe and Kayla Ponder and Michaela Vystrčilová and Konstantin F. Willeke and Mohammad Bashiri and Eric Wang and Zhiwei Ding and Andreas S. Tolias and Fabian H. Sinz and Alexander S. Ecker},
year={2024},
eprint={2305.19654},
archivePrefix={arXiv},
primaryClass={q-bio.NC},
url={https://arxiv.org/abs/2305.19654},
}Original source citation for this subset.
@article{wang2023foundation,
title = {Foundation model of neural activity predicts response to new stimulus types},
author = {Wang, E.Y., Fahey, P.G., Ding, Z. et al. },
journal = {Nature},
year = {2025},
doi = {https://doi.org/10.1038/s41586-025-08829-y}
}